Functional enrichment analysis with clusterProfiler
Type of input
gene list
gene file
enrichment object
Genes to analyze
Upload file
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Upload file
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Analysis options
Pathways
GO Biological Process
GO Cellular Component
GO Molecular Function
KEGG Pathways
Species
Homo sapiens
Mus musculus
Drosophila melanogaster
Oryza sativa
Arabidopsis thaliana
Vitis vinifera
Gene ID source
ENSEMBL
FLYBASE
ENTREZID
SYMBOL
Submit
Visualization
Choose enrichment
Data table
Bar plot
Plots
Download results
Enrichment analysis table
Selected pathways from table
By default we plot all visible rows
Download plot
Type of plot
dotplot
emapplot
cnetplot
X-axis variable
GeneRatio
Count
Color
p.adjust
pvalue
qvalue
# of terms
# of terms
Color
p.adjust
pvalue
qvalue
# of terms
Color edge by terms?
FALSE
TRUE
Circular layout?
FALSE
TRUE
Show node label?
FALSE
TRUE
Download plot